diff --git a/tests/v1/sample/test_logprobs.py b/tests/v1/sample/test_logprobs.py
index fba240fea6a..aa17d2a1004 100644
--- a/tests/v1/sample/test_logprobs.py
+++ b/tests/v1/sample/test_logprobs.py
@@ -564,6 +564,44 @@ def test_logprobs_mode(logprobs_mode: LogprobsMode):
         cleanup_dist_env_and_memory()
 
 
+def test_prompt_logprobs_mode():
+    """prompt_logprobs must respect logprobs_mode: *_logits and *_logprobs
+    must return different values. Prompt tokens skip sampling processors,
+    so processed_* == raw_* on the prompt side."""
+    from vllm import LLM
+
+    values: dict[str, float] = {}
+    for mode in get_args(LogprobsMode):
+        llm = LLM(
+            "facebook/opt-125m",
+            enable_prefix_caching=False,
+            gpu_memory_utilization=0.05,
+            max_model_len=16,
+            logprobs_mode=mode,
+        )
+        try:
+            results = llm.generate(
+                ["Hello world"],
+                sampling_params=SamplingParams(
+                    max_tokens=1, prompt_logprobs=0, temperature=0
+                ),
+            )
+            assert results[0].prompt_logprobs is not None
+            assert results[0].prompt_logprobs[1] is not None
+            tok_id = results[0].prompt_token_ids[1]
+            values[mode] = results[0].prompt_logprobs[1][tok_id].logprob
+        finally:
+            del llm
+            torch.accelerator.empty_cache()
+            cleanup_dist_env_and_memory()
+
+    assert values["raw_logprobs"] <= 0
+    assert values["processed_logprobs"] <= 0
+    assert values["raw_logits"] != values["raw_logprobs"]
+    assert values["processed_logits"] == values["raw_logits"]
+    assert values["processed_logprobs"] == values["raw_logprobs"]
+
+
 class TestCorrectDecodedToken:
     """Unit tests for _correct_decoded_token method in LogprobsProcessor.
 
diff --git a/vllm/config/model.py b/vllm/config/model.py
index e36b672cd82..6b032ae7621 100644
--- a/vllm/config/model.py
+++ b/vllm/config/model.py
@@ -233,6 +233,8 @@ class ModelConfig:
     Raw means the values before applying any logit processors, like bad words.
     Processed means the values after applying all processors, including
     temperature and top_k/top_p.
+    Note: for prompt_logprobs, processed_* and raw_* yield identical results
+    because prompt tokens do not go through sampling processors.
     """
     use_fp64_gumbel: bool = False
     """Whether to use FP64 (instead of FP32) random noise for Gumbel-max and
diff --git a/vllm/config/vllm.py b/vllm/config/vllm.py
index 2e57cb1ec8e..cca9adbcf58 100644
--- a/vllm/config/vllm.py
+++ b/vllm/config/vllm.py
@@ -2202,13 +2202,6 @@ class VllmConfig:
         if model_config is not None and model_config.enable_prompt_embeds:
             unsupported.append("prompt embeds")
 
-        if (
-            model_config is not None
-            and model_config.runner_type == "generate"
-            and model_config.logprobs_mode in ("raw_logits", "processed_logits")
-        ):
-            unsupported.append(f"logprobs mode '{model_config.logprobs_mode}'")
-
         if self.cache_config.kv_sharing_fast_prefill:
             # Will be added by https://github.com/vllm-project/vllm/pull/35045
             unsupported.append("KV sharing fast prefill")
diff --git a/vllm/model_executor/models/diffusion_gemma.py b/vllm/model_executor/models/diffusion_gemma.py
index 11a10131df1..70566871e09 100644
--- a/vllm/model_executor/models/diffusion_gemma.py
+++ b/vllm/model_executor/models/diffusion_gemma.py
@@ -53,7 +53,7 @@ from vllm.v1.worker.gpu.attn_utils import build_attn_metadata
 from vllm.v1.worker.gpu.buffer_utils import UvaBackedTensor, async_copy_to_gpu
 from vllm.v1.worker.gpu.input_batch import InputBatch
 from vllm.v1.worker.gpu.model_states.interface import ModelState
-from vllm.v1.worker.gpu.sample.logprob import compute_topk_logprobs
+from vllm.v1.worker.gpu.sample.logprob import compute_topk_scores
 from vllm.v1.worker.gpu.sample.output import SamplerOutput
 from vllm.v1.worker.gpu.sample.penalties import use_penalty
 from vllm.v1.worker.gpu.states import RequestState
@@ -1064,6 +1064,7 @@ class DiffusionSampler:
     ):
         self.sampling_states = sampler.sampling_states
         self.req_states = sampler.req_states
+        self.logits_mode = sampler.logprobs_mode in ("raw_logits", "processed_logits")
         # Self-conditioning soft embed = probs @ embed_weight * normalizer,
         # computed in the sampler (see _compiled_sample_step). ``embed_weight``
         # is the vocab-parallel shard; [sc_vocab_start, sc_vocab_end) is this
@@ -1359,10 +1360,11 @@ class DiffusionSampler:
                         # positions are never emitted.
                         k_i = int(valid_canvas_len_np[start_req + li])
                         pos = li * CL
-                        self._pending_logprobs[slot.item()] = compute_topk_logprobs(
+                        self._pending_logprobs[slot.item()] = compute_topk_scores(
                             flat_logits[pos : pos + k_i],
                             max_num_logprobs,
                             argmax_tokens[local_idx][:k_i],
+                            logits_mode=self.logits_mode,
                         )
 
         # Commit steps: is_committing was True at entry. Reassemble previously
diff --git a/vllm/v1/sample/rejection_sampler.py b/vllm/v1/sample/rejection_sampler.py
index 69309213836..0f56b8a4a2c 100644
--- a/vllm/v1/sample/rejection_sampler.py
+++ b/vllm/v1/sample/rejection_sampler.py
@@ -67,8 +67,14 @@ class RejectionSampler(nn.Module):
         self.sampler = sampler
         self.use_fp64_gumbel = getattr(sampler, "use_fp64_gumbel", False)
         logprobs_mode = self.sampler.logprobs_mode
-        self.is_processed_logprobs_mode = logprobs_mode.startswith("processed")
-        self.is_logits_logprobs_mode = logprobs_mode.endswith("logits")
+        self.is_processed_logprobs_mode = logprobs_mode in (
+            "processed_logprobs",
+            "processed_logits",
+        )
+        self.is_logits_logprobs_mode = logprobs_mode in (
+            "raw_logits",
+            "processed_logits",
+        )
 
         self.synthetic_conditional_rates: torch.Tensor | None = None
         if (
diff --git a/vllm/v1/worker/gpu/model_runner.py b/vllm/v1/worker/gpu/model_runner.py
index 2bb52e2fd89..518d12a6b28 100644
--- a/vllm/v1/worker/gpu/model_runner.py
+++ b/vllm/v1/worker/gpu/model_runner.py
@@ -341,7 +341,10 @@ class GPUModelRunner(LoRAModelRunnerMixin):
                     self.speculative_config,
                     self.device,
                 )
-            self.prompt_logprobs_worker = PromptLogprobsWorker(self.max_num_reqs)
+            self.prompt_logprobs_worker = PromptLogprobsWorker(
+                self.max_num_reqs,
+                logprobs_mode=self.model_config.logprobs_mode,
+            )
             self.structured_outputs_worker = StructuredOutputsWorker(
                 max_num_logits=self.max_num_reqs * self.decode_query_len,
                 vocab_size=self.vocab_size,
diff --git a/vllm/v1/worker/gpu/sample/logprob.py b/vllm/v1/worker/gpu/sample/logprob.py
index cb2cf1a590e..c0f31cdf9f0 100644
--- a/vllm/v1/worker/gpu/sample/logprob.py
+++ b/vllm/v1/worker/gpu/sample/logprob.py
@@ -106,7 +106,7 @@ def compute_token_logprobs(
     return logprobs
 
 
-def compute_topk_logprobs(
+def compute_topk_scores(
     logits: torch.Tensor,
     num_logprobs: int,
     sampled_token_ids: torch.Tensor,
@@ -114,6 +114,7 @@ def compute_topk_logprobs(
     logprob_token_ids_state: "LogprobTokenIdsState | None" = None,
     expanded_idx_mapping: torch.Tensor | None = None,
     max_per_req_token_ids: int = 0,
+    logits_mode: bool = False,
 ) -> LogprobsTensors:
     assert num_logprobs >= 0
     batch_size, vocab_size = logits.shape
@@ -124,7 +125,10 @@ def compute_topk_logprobs(
         if num_logprobs > 0:
             topk_indices = torch.topk(logits, num_logprobs, dim=-1).indices
             logprob_token_ids = torch.cat((logprob_token_ids, topk_indices), dim=1)
-        logprobs = compute_token_logprobs(logits, logprob_token_ids)
+        if logits_mode:
+            scores = logits.gather(-1, logprob_token_ids).to(torch.float32)
+        else:
+            scores = compute_token_logprobs(logits, logprob_token_ids)
     else:
         # Some requests specified logprob_token_ids. Build the [batch_size,
         # 1 + max_cols] token_ids matrix and validity mask on the GPU via a
@@ -158,8 +162,11 @@ def compute_topk_logprobs(
             NUM_TOPK=num_logprobs,
             PADDED_COLS=triton.next_power_of_2(num_cols),
         )
-        logprobs = compute_token_logprobs(logits, logprob_token_ids)
-        logprobs = logprobs.masked_fill(~valid_mask, float("-inf"))
+        if logits_mode:
+            scores = logits.gather(-1, logprob_token_ids).to(torch.float32)
+        else:
+            scores = compute_token_logprobs(logits, logprob_token_ids)
+        scores = scores.masked_fill(~valid_mask, float("-inf"))
 
     token_ranks = torch.empty(batch_size, dtype=torch.int64, device=logits.device)
     _ranks_kernel[(batch_size,)](
@@ -172,7 +179,7 @@ def compute_topk_logprobs(
     )
     return LogprobsTensors(
         logprob_token_ids=logprob_token_ids,
-        logprobs=logprobs,
+        logprobs=scores,
         selected_token_ranks=token_ranks,
         cu_num_generated_tokens=cu_num_logits,
     )
diff --git a/vllm/v1/worker/gpu/sample/prompt_logprob.py b/vllm/v1/worker/gpu/sample/prompt_logprob.py
index b89ebac35d9..4d4cc244825 100644
--- a/vllm/v1/worker/gpu/sample/prompt_logprob.py
+++ b/vllm/v1/worker/gpu/sample/prompt_logprob.py
@@ -5,16 +5,18 @@ from collections.abc import Callable
 import numpy as np
 import torch
 
+from vllm.config.model import LogprobsMode
 from vllm.sampling_params import SamplingParams
 from vllm.triton_utils import tl, triton
 from vllm.v1.outputs import LogprobsTensors
 from vllm.v1.worker.gpu.input_batch import InputBatch
-from vllm.v1.worker.gpu.sample.logprob import compute_topk_logprobs
+from vllm.v1.worker.gpu.sample.logprob import compute_topk_scores
 
 
 class PromptLogprobsWorker:
-    def __init__(self, max_num_reqs: int):
+    def __init__(self, max_num_reqs: int, logprobs_mode: LogprobsMode = "raw_logprobs"):
         self.max_num_reqs = max_num_reqs
+        self.logprobs_mode = logprobs_mode
 
         self.uses_prompt_logprobs = np.zeros(self.max_num_reqs, dtype=bool)
         self.num_prompt_logprobs = np.zeros(self.max_num_reqs, dtype=np.int32)
@@ -82,6 +84,7 @@ class PromptLogprobsWorker:
                 hidden_states[: input_batch.num_tokens],
                 logits_fn,
                 max_num_prompt_logprobs,
+                self.logprobs_mode,
             )
         )
 
@@ -206,33 +209,36 @@ def compute_prompt_logprobs_with_chunking(
     prompt_hidden_states: torch.Tensor,
     logits_fn: Callable[[torch.Tensor], torch.Tensor],
     num_prompt_logprobs: int,
+    logprobs_mode: LogprobsMode = "raw_logprobs",
 ) -> tuple[torch.Tensor, torch.Tensor, torch.Tensor]:
     # Since materializing the full prompt logits can take too much memory,
     # we compute it in chunks.
     CHUNK_SIZE = 1024
     token_ids = []
-    logprobs = []
+    scores = []
     ranks = []
+    logits_mode = logprobs_mode in ("raw_logits", "processed_logits")
     prompt_token_ids = prompt_token_ids.to(torch.int64)
     for start_idx in range(0, prompt_token_ids.shape[0], CHUNK_SIZE):
         end_idx = start_idx + CHUNK_SIZE
         # NOTE(woosuk): logits_fn can be slow because it involves all-gather.
         prompt_logits = logits_fn(prompt_hidden_states[start_idx:end_idx])
-        requested_num_prompt_logprobs = (
+        requested_num = (
             prompt_logits.shape[-1]
             if num_prompt_logprobs == -1
             else num_prompt_logprobs
         )
-        prompt_logprobs = compute_topk_logprobs(
+        result = compute_topk_scores(
             prompt_logits,
-            requested_num_prompt_logprobs,
+            requested_num,
             prompt_token_ids[start_idx:end_idx],
+            logits_mode=logits_mode,
         )
-        token_ids.append(prompt_logprobs.logprob_token_ids)
-        logprobs.append(prompt_logprobs.logprobs)
-        ranks.append(prompt_logprobs.selected_token_ranks)
+        token_ids.append(result.logprob_token_ids)
+        scores.append(result.logprobs)
+        ranks.append(result.selected_token_ranks)
 
     token_ids = torch.cat(token_ids, dim=0) if len(token_ids) > 1 else token_ids[0]
-    logprobs = torch.cat(logprobs, dim=0) if len(logprobs) > 1 else logprobs[0]
+    scores = torch.cat(scores, dim=0) if len(scores) > 1 else scores[0]
     ranks = torch.cat(ranks, dim=0) if len(ranks) > 1 else ranks[0]
-    return token_ids, logprobs, ranks
+    return token_ids, scores, ranks
diff --git a/vllm/v1/worker/gpu/sample/sampler.py b/vllm/v1/worker/gpu/sample/sampler.py
index b269de9eaed..f0a83c92efb 100644
--- a/vllm/v1/worker/gpu/sample/sampler.py
+++ b/vllm/v1/worker/gpu/sample/sampler.py
@@ -19,7 +19,7 @@ from vllm.v1.worker.gpu.sample.gumbel import gumbel_sample
 from vllm.v1.worker.gpu.sample.logit_bias import LogitBiasState
 from vllm.v1.worker.gpu.sample.logprob import (
     LogprobTokenIdsState,
-    compute_topk_logprobs,
+    compute_topk_scores,
 )
 from vllm.v1.worker.gpu.sample.output import SamplerOutput
 from vllm.v1.worker.gpu.sample.penalties import PenaltiesState
@@ -38,8 +38,6 @@ class Sampler:
         num_speculative_tokens: int = 1,
         use_fp64_gumbel: bool = False,
     ):
-        if logprobs_mode not in ("processed_logprobs", "raw_logprobs"):
-            raise NotImplementedError(f"Unsupported logprobs_mode: {logprobs_mode}")
         self.logprobs_mode = logprobs_mode
         self.compute_nans = envs.VLLM_COMPUTE_NANS_IN_LOGITS  # False by default.
         self.use_fp64_gumbel = use_fp64_gumbel
@@ -102,12 +100,12 @@ class Sampler:
         )
 
         if return_logprobs:
-            if self.logprobs_mode == "processed_logprobs":
+            if self.logprobs_mode in ("processed_logprobs", "processed_logits"):
                 logits = processed_logits
             expanded_logits = logits.shape[0] != idx_mapping_np.shape[0]
             cu_num_logits = cu_num_logits_np.tolist() if expanded_logits else None
             num_logprobs = max_num_logprobs if max_num_logprobs != NO_LOGPROBS else 0
-            logprobs_tensors = compute_topk_logprobs(
+            logprobs_tensors = compute_topk_scores(
                 logits,
                 num_logprobs,
                 sampled,
@@ -115,6 +113,7 @@ class Sampler:
                 logprob_token_ids_state=self.logprob_token_ids_state,
                 expanded_idx_mapping=input_batch.expanded_idx_mapping,
                 max_per_req_token_ids=max_per_req_token_ids,
+                logits_mode=self.logprobs_mode in ("raw_logits", "processed_logits"),
             )
         else:
             logprobs_tensors = None
@@ -222,7 +221,10 @@ class Sampler:
             # any greedy requests or per-request seeds, or if post-processed
             # logprobs need to be returned for any requests.
             (top_k is None and top_p is None)
-            or (return_logprobs and self.logprobs_mode == "processed_logprobs")
+            or (
+                return_logprobs
+                and self.logprobs_mode in ("processed_logprobs", "processed_logits")
+            )
             or self.sampling_states.any_greedy(idx_mapping_np)
             or self.sampling_states.any_explicit_seed(idx_mapping_np)
         )
diff --git a/vllm/v1/worker/gpu/spec_decode/rejection_sampler.py b/vllm/v1/worker/gpu/spec_decode/rejection_sampler.py
index c56252d55d7..4753d281746 100644
--- a/vllm/v1/worker/gpu/spec_decode/rejection_sampler.py
+++ b/vllm/v1/worker/gpu/spec_decode/rejection_sampler.py
@@ -11,7 +11,7 @@ from vllm.v1.worker.gpu.input_batch import (
     get_num_sampled_and_rejected,
 )
 from vllm.v1.worker.gpu.metrics.logits import get_num_nans
-from vllm.v1.worker.gpu.sample.logprob import compute_topk_logprobs
+from vllm.v1.worker.gpu.sample.logprob import compute_topk_scores
 from vllm.v1.worker.gpu.sample.output import SamplerOutput
 from vllm.v1.worker.gpu.sample.sampler import Sampler
 from vllm.v1.worker.gpu.sample.states import NO_LOGPROBS
@@ -91,11 +91,13 @@ class RejectionSampler:
             num_warps=1,
         )
         expanded_logits = num_logits != input_batch.idx_mapping.shape[0]
-        return compute_topk_logprobs(
+        return compute_topk_scores(
             logits,
             max_num_logprobs,
             flat_sampled,
             input_batch.cu_num_logits_np.tolist() if expanded_logits else None,
+            logits_mode=self.sampler.logprobs_mode
+            in ("raw_logits", "processed_logits"),
         )
 
     def __call__(
@@ -139,7 +141,7 @@ class RejectionSampler:
             sampled,
             num_sampled,
             processed_logits
-            if self.sampler.logprobs_mode == "processed_logprobs"
+            if self.sampler.logprobs_mode in ("processed_logprobs", "processed_logits")
             else logits,
         )
 
diff --git a/vllm/v1/worker/gpu_model_runner.py b/vllm/v1/worker/gpu_model_runner.py
index 2c7adaaf2ae..f3f0afb1301 100644
--- a/vllm/v1/worker/gpu_model_runner.py
+++ b/vllm/v1/worker/gpu_model_runner.py
@@ -5635,10 +5635,15 @@ class GPUModelRunner(
             # to gather the logprob for.
             tgt_token_ids = prompt_token_ids[start_tok : start_tok + num_logits]
 
-            # Compute prompt logprobs.
-            logprobs = self.sampler.compute_logprobs(logits)
+            # Compute prompt scores respecting logprobs_mode.
+            # NOTE: prompt tokens skip sampling processors, so
+            # processed_* and raw_* yield the same scores here.
+            if self.model_config.logprobs_mode in ("raw_logits", "processed_logits"):
+                scores = logits.to(torch.float32)
+            else:
+                scores = self.sampler.compute_logprobs(logits)
             token_ids, logprobs, ranks, _ = self.sampler.gather_logprobs(
-                logprobs, num_prompt_logprobs, tgt_token_ids
+                scores, num_prompt_logprobs, tgt_token_ids
             )
 
             # Transfer GPU->CPU async.